Difference between revisions of "SJ07762"

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(Created page with "Category:gene == Gene SJ21564 == * transcription-direction: ** positive * right-end-position: ** 372873 * left-end-position: ** 368358 * centisome-position: ** 61.890495...")
(Created page with "Category:gene == Gene SJ22183 == * transcription-direction: ** negative * right-end-position: ** 19323 * left-end-position: ** 11412 * centisome-position: ** 6.3480763...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21564 ==
+
== Gene SJ22183 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 372873
+
** 19323
 
* left-end-position:
 
* left-end-position:
−
** 368358
+
** 11412
 
* centisome-position:
 
* centisome-position:
−
** 61.890495    
+
** 6.3480763    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN]]
+
* [[ARYLFORMAMIDASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17150]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[LEU-DEG2-PWY]]
+
* [[PWY-7717]]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY66-367]]
+
* [[TRPCAT-PWY]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5074]]
+
* [[PWY-5651]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7765]]
−
{{#set: right-end-position=372873}}
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
{{#set: left-end-position=368358}}
+
* [[PWY-6309]]
−
{{#set: centisome-position=61.890495   }}
+
** '''7''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7733]]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7734]]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=19323}}
 +
{{#set: left-end-position=11412}}
 +
{{#set: centisome-position=6.3480763   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=7}}

Revision as of 12:58, 14 January 2021

Gene SJ22183

  • transcription-direction:
    • negative
  • right-end-position:
    • 19323
  • left-end-position:
    • 11412
  • centisome-position:
    • 6.3480763

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7717
    • 3 reactions found over 6 reactions in the full pathway
  • TRPCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5651
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7765
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6309
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-7733
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7734
    • 1 reactions found over 10 reactions in the full pathway




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