Difference between revisions of "SJ07838"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15675 CPD-15675] == * common-name: ** 2-trans-6-trans-tridecadienoyl-coa * smiles: ** ccccc...")
(Created page with "Category:gene == Gene SJ16448 == * transcription-direction: ** negative * right-end-position: ** 151146 * left-end-position: ** 138531 * centisome-position: ** 49.05732...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15675 CPD-15675] ==
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== Gene SJ16448 ==
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* common-name:
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* transcription-direction:
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** 2-trans-6-trans-tridecadienoyl-coa
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** negative
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* smiles:
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* right-end-position:
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** ccccccc=cccc=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** 151146
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* inchi-key:
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* left-end-position:
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** oosdlbaxvxkfib-bjbrngjvsa-j
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** 138531
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* molecular-weight:
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* centisome-position:
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** 955.803
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** 49.05732   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-14786]]
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* [[S.japonica_sterols_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-14785]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) of unknown directionality ==
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* [[3.1.1.64-RXN]]
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{{#set: common-name=2-trans-6-trans-tridecadienoyl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=oosdlbaxvxkfib-bjbrngjvsa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=955.803}}
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* [[CARBOXYLESTERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[LYSOPHOSPHOLIPASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10711]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10767]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12252]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12575]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15035]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXNQT-4366]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6303]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6857]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7409]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=151146}}
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{{#set: left-end-position=138531}}
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{{#set: centisome-position=49.05732    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=10}}
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{{#set: nb pathway associated=3}}

Revision as of 20:20, 18 December 2020

Gene SJ16448

  • transcription-direction:
    • negative
  • right-end-position:
    • 151146
  • left-end-position:
    • 138531
  • centisome-position:
    • 49.05732

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7409
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07838&oldid=41032"