Difference between revisions of "SJ07868"
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(Created page with "Category:gene == Gene SJ16637 == * transcription-direction: ** positive * right-end-position: ** 196487 * left-end-position: ** 183773 * centisome-position: ** 66.00473...") |
(Created page with "Category:gene == Gene SJ12906 == * transcription-direction: ** negative * right-end-position: ** 14433 * left-end-position: ** 8512 * centisome-position: ** 58.453506...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ12906 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 14433 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 8512 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 58.453506 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | + | * [[ARGINASE-RXN]] | |
| − | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-34]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-6922]] |
| − | ** ''' | + | ** '''5''' reactions found over '''7''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-4984]] |
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[ARG-GLU-PWY]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-6305]] | ||
** '''4''' reactions found over '''4''' reactions in the full pathway | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| − | * [[PWY- | + | * [[ARG-PRO-PWY]] |
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[ARGASEDEG-PWY]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[CITRULBIO-PWY]] | ||
| + | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-31]] | ||
** '''1''' reactions found over '''2''' reactions in the full pathway | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
| − | + | {{#set: transcription-direction=negative}} | |
| − | + | {{#set: right-end-position=14433}} | |
| − | {{#set: transcription-direction= | + | {{#set: left-end-position=8512}} |
| − | {{#set: right-end-position= | + | {{#set: centisome-position=58.453506 }} |
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=8}} |
Revision as of 14:21, 26 August 2019
Contents
Gene SJ12906
- transcription-direction:
- negative
- right-end-position:
- 14433
- left-end-position:
- 8512
- centisome-position:
- 58.453506
Organism(s) associated with this gene
Reaction(s) associated
- ARGINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-34
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6922
- 5 reactions found over 7 reactions in the full pathway
- PWY-4984
- 5 reactions found over 5 reactions in the full pathway
- ARG-GLU-PWY
- 2 reactions found over 2 reactions in the full pathway
- PWY-6305
- 4 reactions found over 4 reactions in the full pathway
- ARG-PRO-PWY
- 3 reactions found over 4 reactions in the full pathway
- ARGASEDEG-PWY
- 3 reactions found over 3 reactions in the full pathway
- CITRULBIO-PWY
- 7 reactions found over 8 reactions in the full pathway
- PWY-31
- 1 reactions found over 2 reactions in the full pathway
