Difference between revisions of "SJ07886"

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(Created page with "Category:gene == Gene SJ10727 == * transcription-direction: ** negative * right-end-position: ** 26947 * left-end-position: ** 5676 * centisome-position: ** 20.837769...")
(Created page with "Category:gene == Gene SJ07886 == * transcription-direction: ** positive * right-end-position: ** 50454 * left-end-position: ** 43207 * centisome-position: ** 71.00809...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10727 ==
+
== Gene SJ07886 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 26947
+
** 50454
 
* left-end-position:
 
* left-end-position:
−
** 5676
+
** 43207
 
* centisome-position:
 
* centisome-position:
−
** 20.837769    
+
** 71.00809    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-15117]]
+
* [[ATPASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-5470]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7817]]
+
* [[PWY-6545]]
−
** '''6''' reactions found over '''16''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
+
* [[PWY-7210]]
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7198]]
−
{{#set: right-end-position=26947}}
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: left-end-position=5676}}
+
* [[PWY-7184]]
−
{{#set: centisome-position=20.837769   }}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: transcription-direction=positive}}
−
{{#set: nb reaction associated=2}}
+
{{#set: right-end-position=50454}}
−
{{#set: nb pathway associated=2}}
+
{{#set: left-end-position=43207}}
 +
{{#set: centisome-position=71.00809   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:06, 18 March 2021

Gene SJ07886

  • transcription-direction:
    • positive
  • right-end-position:
    • 50454
  • left-end-position:
    • 43207
  • centisome-position:
    • 71.00809

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07886&oldid=134242"