Difference between revisions of "SJ07898"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OH-HEXANOYL-COA OH-HEXANOYL-COA] == * common-name: ** (s)-3-hydroxyhexanoyl-coa * smiles: ** cc...")
 
(Created page with "Category:gene == Gene SJ07898 == * transcription-direction: ** positive * right-end-position: ** 194382 * left-end-position: ** 173224 * centisome-position: ** 38.714554...")
 
(9 intermediate revisions by 4 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OH-HEXANOYL-COA OH-HEXANOYL-COA] ==
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== Gene SJ07898 ==
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* common-name:
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* transcription-direction:
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** (s)-3-hydroxyhexanoyl-coa
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** positive
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* smiles:
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* right-end-position:
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** cccc(cc(sccnc(ccnc(c(c(cop(=o)([o-])op(occ1(oc(c(c1op([o-])([o-])=o)o)n3(c=nc2(c(=nc=nc=23)n))))([o-])=o)(c)c)o)=o)=o)=o)o
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** 194382
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* inchi-key:
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* left-end-position:
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** vaahkrmgofiorx-dwufxmdisa-j
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** 173224
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* molecular-weight:
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* centisome-position:
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** 877.646
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** 38.714554   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[ECOAH2h]]
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* [[S.japonica_carotenoid_curated]]
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* [[HACD2h]]
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== Reaction(s) associated ==
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* [[RXN-12567]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) known to produce the compound ==
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* [[2.4.1.223-RXN]]
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* [[ECOAH2h]]
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** Category: [[annotation]]
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* [[HACD2h]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12570]]
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** Category: [[orthology]]
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== Reaction(s) of unknown directionality ==
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: common-name=(s)-3-hydroxyhexanoyl-coa}}
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* [[RXN-10606]]
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{{#set: inchi-key=inchikey=vaahkrmgofiorx-dwufxmdisa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=877.646}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10607]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10608]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10609]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10616]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10617]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10618]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10619]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10784]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-11060]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13607]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13608]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14361]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-9000]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN66-162]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN66-168]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN66-83]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[UDP-GLUCURONOSYLTRANSFERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6558]]
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** '''7''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-6261]]
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** '''10''' reactions found over '''15''' reactions in the full pathway
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* [[PWY-6313]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6398]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5756]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY66-221]]
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** '''5''' reactions found over '''18''' reactions in the full pathway
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* [[PWY66-201]]
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** '''3''' reactions found over '''16''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=194382}}
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{{#set: left-end-position=173224}}
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{{#set: centisome-position=38.714554    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=19}}
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{{#set: nb pathway associated=7}}

Latest revision as of 11:03, 18 March 2021

Gene SJ07898

  • transcription-direction:
    • positive
  • right-end-position:
    • 194382
  • left-end-position:
    • 173224
  • centisome-position:
    • 38.714554

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6558
    • 7 reactions found over 13 reactions in the full pathway
  • PWY-6261
    • 10 reactions found over 15 reactions in the full pathway
  • PWY-6313
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6398
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5756
    • 1 reactions found over 8 reactions in the full pathway
  • PWY66-221
    • 5 reactions found over 18 reactions in the full pathway
  • PWY66-201
    • 3 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07898&oldid=132750"