Difference between revisions of "SJ07914"

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(Created page with "Category:gene == Gene SJ04758 == * transcription-direction: ** negative * right-end-position: ** 16891 * left-end-position: ** 11934 * centisome-position: ** 11.756130...")
(Created page with "Category:gene == Gene SJ22175 == * transcription-direction: ** positive * right-end-position: ** 113295 * left-end-position: ** 106400 * centisome-position: ** 59.18641...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04758 ==
+
== Gene SJ22175 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 16891
+
** 113295
 
* left-end-position:
 
* left-end-position:
−
** 11934
+
** 106400
 
* centisome-position:
 
* centisome-position:
−
** 11.756130    
+
** 59.18641    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-11837]]
+
* [[CARBODEHYDRAT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-11838]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
+
* [[RXN0-5224]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
== Pathway(s) associated ==
−
{{#set: right-end-position=16891}}
+
* [[PWY-6142]]
−
{{#set: left-end-position=11934}}
+
** '''10''' reactions found over '''13''' reactions in the full pathway
−
{{#set: centisome-position=11.756130   }}
+
* [[PWYQT-4429]]
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
{{#set: nb reaction associated=3}}
+
* [[CYANCAT-PWY]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5744]]
 +
** '''4''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5789]]
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-5743]]
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-241]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7115]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7117]]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=113295}}
 +
{{#set: left-end-position=106400}}
 +
{{#set: centisome-position=59.18641   }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=9}}

Revision as of 20:24, 18 December 2020

Gene SJ22175

  • transcription-direction:
    • positive
  • right-end-position:
    • 113295
  • left-end-position:
    • 106400
  • centisome-position:
    • 59.18641

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWYQT-4429
    • 2 reactions found over 2 reactions in the full pathway
  • CYANCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-241
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7115
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-7117
    • 10 reactions found over 12 reactions in the full pathway




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