Difference between revisions of "SJ07922"

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(Created page with "Category:gene == Gene SJ05004 == * transcription-direction: ** negative * right-end-position: ** 279718 * left-end-position: ** 272009 * centisome-position: ** 54.056595...")
(Created page with "Category:gene == Gene SJ07922 == * transcription-direction: ** negative * right-end-position: ** 12596 * left-end-position: ** 6043 * centisome-position: ** 10.119566...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05004 ==
+
== Gene SJ07922 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 279718
+
** 12596
 
* left-end-position:
 
* left-end-position:
−
** 272009
+
** 6043
 
* centisome-position:
 
* centisome-position:
−
** 54.056595    
+
** 10.119566    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[D-PPENTOMUT-RXN]]
+
* [[FADSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PHOSPHOGLUCMUT-RXN]]
+
* [[RIBOFLAVINKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PPENTOMUT-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[RXN0-5187]]
−
* [[RXN-16997]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16998]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY66-366]]
−
* [[PWY-7180]]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[RIBOSYN2-PWY]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6167]]
 +
** '''5''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6168]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7863]]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5523]]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6737]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7238]]
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GLYCOGENSYNTH-PWY]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[GLUCOSE1PMETAB-PWY]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7900]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6731]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5941]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[GLYCOCAT-PWY]]
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-622]]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6317]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-2723]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-3801]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7343]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5940]]
 
−
** '''2''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-7902]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5384]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5661]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY66-422]]
 
−
** '''5''' reactions found over '''n.a''' reactions in the full pathway
 
−
* [[PWY0-661]]
 
−
** '''1''' reactions found over '''n.a''' reactions in the full pathway
 
−
* [[PWY0-1296]]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=279718}}
+
{{#set: right-end-position=12596}}
−
{{#set: left-end-position=272009}}
+
{{#set: left-end-position=6043}}
−
{{#set: centisome-position=54.056595   }}
+
{{#set: centisome-position=10.119566   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=21}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:07, 18 March 2021

Gene SJ07922

  • transcription-direction:
    • negative
  • right-end-position:
    • 12596
  • left-end-position:
    • 6043
  • centisome-position:
    • 10.119566

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-366
    • 2 reactions found over 2 reactions in the full pathway
  • RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-6167
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-6168
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-7863
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-5523
    • 1 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07922&oldid=134694"