Difference between revisions of "SJ07984"

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(Created page with "Category:gene == Gene SJ03195 == * transcription-direction: ** negative * right-end-position: ** 113649 * left-end-position: ** 109177 * centisome-position: ** 88.05378...")
(Created page with "Category:gene == Gene SJ08692 == * transcription-direction: ** negative * right-end-position: ** 315483 * left-end-position: ** 298019 * centisome-position: ** 68.62797...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03195 ==
+
== Gene SJ08692 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 113649
+
** 315483
 
* left-end-position:
 
* left-end-position:
−
** 109177
+
** 298019
 
* centisome-position:
 
* centisome-position:
−
** 88.05378    
+
** 68.62797    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[ADENPHOSPHOR-RXN]]
+
* [[ACYLCOASYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DEOXYADENPHOSPHOR-RXN]]
+
* [[LINOLENOYL-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DEOXYGUANPHOSPHOR-RXN]]
+
* [[R223-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DEOXYINOPHOSPHOR-RXN]]
+
* [[RXN-12184]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[INOPHOSPHOR-RXN]]
+
* [[RXN-12978]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13290]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13614]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16380]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16389]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16393]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16401]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16402]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16415]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16418]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7904]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9623]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[M5TAP]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[PNP-RXN]]
+
* [[RXN-9644]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-11715]]
+
* [[RXN-9673]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-11743]]
+
* [[RXN0-7238]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14029]]
+
* [[RXN0-7239]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7001]]
+
* [[RXN0-7248]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5199]]
+
* [[RXN66-469]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[URA-PHOSPH-RXN]]
+
* [[RXN66-477]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[URPHOS-RXN]]
+
* [[RXN66-480]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[XANTHOSINEPHOSPHORY-RXN]]
+
* [[RXN66-483]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-484]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[TRANS-RXN0-623]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[llcoas]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-5532]]
+
* [[PWY-7288]]
−
** '''4''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY0-1296]]
+
* [[PWY66-391]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[FAO-PWY]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5136]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7049]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7724]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6920]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[P221-PWY]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6733]]
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-7094]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5989]]
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[P121-PWY]]
+
* [[PWY-321]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''16''' reactions in the full pathway
−
* [[PWY-6609]]
+
* [[PWY-1121]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''9''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY-6611]]
+
* [[PWY-5971]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
−
* [[PWY-7179]]
+
* [[PWY-6873]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7033]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6803]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7179-1]]
+
* [[PWY-5885]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[SALVADEHYPOX-PWY]]
+
* [[PWY-5143]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-6627]]
+
* [[PWY-5972]]
−
** '''3''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-6644]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-4202]]
 
 
** '''4''' reactions found over '''6''' reactions in the full pathway
 
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6608]]
+
* [[PWY-6001]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6620]]
 
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7181]]
+
* [[PWY-5147]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY0-1295]]
+
* [[PWY-6000]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5695]]
+
* [[PWY66-387]]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY66-388]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY66-389]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[SALVPURINE2-PWY]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
</div>
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=113649}}
+
{{#set: right-end-position=315483}}
−
{{#set: left-end-position=109177}}
+
{{#set: left-end-position=298019}}
−
{{#set: centisome-position=88.05378   }}
+
{{#set: centisome-position=68.62797   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=15}}
+
{{#set: nb reaction associated=28}}
−
{{#set: nb pathway associated=17}}
+
{{#set: nb pathway associated=26}}

Revision as of 12:59, 14 January 2021

Gene SJ08692

  • transcription-direction:
    • negative
  • right-end-position:
    • 315483
  • left-end-position:
    • 298019
  • centisome-position:
    • 68.62797

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7288
    • 4 reactions found over 5 reactions in the full pathway
  • PWY66-391
    • 6 reactions found over 7 reactions in the full pathway
  • FAO-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-5136
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7049
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7724
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-6920
    • 5 reactions found over 6 reactions in the full pathway
  • P221-PWY
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6733
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-7094
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5989
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-321
    • 3 reactions found over 16 reactions in the full pathway
  • PWY-1121
    • 9 reactions found over 19 reactions in the full pathway
  • PWY-5971
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-6873
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7033
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6803
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5885
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5143
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5972
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6001
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5147
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6000
    • 2 reactions found over 2 reactions in the full pathway
  • PWY66-387
    • 4 reactions found over 6 reactions in the full pathway
  • PWY66-388
    • 2 reactions found over 7 reactions in the full pathway
  • PWY66-389
    • 4 reactions found over 4 reactions in the full pathway




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