Difference between revisions of "SJ08019"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15431 CPD-15431] == * common-name: ** n-acetyl-α-d-galactosaminyl-(1→3)-n-acetyl...")
 
(Created page with "Category:gene == Gene SJ08019 == * transcription-direction: ** negative * right-end-position: ** 197017 * left-end-position: ** 182582 * centisome-position: ** 40.989597...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15431 CPD-15431] ==
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== Gene SJ08019 ==
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* common-name:
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* transcription-direction:
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** n-acetyl-α-d-galactosaminyl-(1→3)-n-acetyl-α-d-galactosaminyldiphospho-ditrans,octacis-undecaprenol
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** negative
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* smiles:
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* right-end-position:
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** cc(c)=cccc(c)=cccc(c)=cccc(=cccc(=cccc(=cccc(c)=cccc(=cccc(=cccc(=cccc(=ccop(=o)([o-])op([o-])(=o)oc1(c(c(c(c(o1)co)o)oc2(oc(co)c(o)c(o)c(nc(=o)c)2))nc(c)=o))c)c)c)c)c)c)c
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** 197017
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* inchi-key:
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* left-end-position:
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** sgclprbyahbrpd-qozjjacasa-l
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** 182582
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* molecular-weight:
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* centisome-position:
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** 1331.648
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** 40.989597   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-14561]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[PHOSCHOL-RXN]]
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{{#set: common-name=n-acetyl-α-d-galactosaminyl-(1→3)-n-acetyl-α-d-galactosaminyldiphospho-ditrans,octacis-undecaprenol}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=sgclprbyahbrpd-qozjjacasa-l}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=1331.648}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-12116]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7039]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-3561]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[LIPASYN-PWY]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=197017}}
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{{#set: left-end-position=182582}}
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{{#set: centisome-position=40.989597    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=3}}

Latest revision as of 11:02, 18 March 2021

Gene SJ08019

  • transcription-direction:
    • negative
  • right-end-position:
    • 197017
  • left-end-position:
    • 182582
  • centisome-position:
    • 40.989597

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7039
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-3561
    • 3 reactions found over 3 reactions in the full pathway
  • LIPASYN-PWY
    • 5 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08019&oldid=132350"