Difference between revisions of "SJ08046"
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(Created page with "Category:gene == Gene SJ04699 == * transcription-direction: ** positive * right-end-position: ** 18762 * left-end-position: ** 3239 * centisome-position: ** 3.1744633...") |
(Created page with "Category:gene == Gene SJ05219 == * transcription-direction: ** positive * right-end-position: ** 92228 * left-end-position: ** 77297 * centisome-position: ** 81.13978...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ05219 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 92228 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 77297 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 81.13978 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[RXN-11190]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[SPERMIDINESYN-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[SPERMINE-SYNTHASE-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY | + | * [[BSUBPOLYAMSYN-PWY]] |
| − | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| − | * [[PWY | + | * [[ARGSPECAT-PWY]] |
| − | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| − | * [[ | + | * [[POLYAMINSYN3-PWY]] |
| − | + | ** '''4''' reactions found over '''1''' reactions in the full pathway | |
| − | |||
| − | ** ''' | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=92228}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=77297}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=81.13978 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 15:23, 5 January 2021
Contents
Gene SJ05219
- transcription-direction:
- positive
- right-end-position:
- 92228
- left-end-position:
- 77297
- centisome-position:
- 81.13978
Organism(s) associated with this gene
Reaction(s) associated
- RXN-11190
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- SPERMIDINESYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- SPERMINE-SYNTHASE-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- BSUBPOLYAMSYN-PWY
- 2 reactions found over 2 reactions in the full pathway
- ARGSPECAT-PWY
- 2 reactions found over 2 reactions in the full pathway
- POLYAMINSYN3-PWY
- 4 reactions found over 1 reactions in the full pathway
