Difference between revisions of "SJ08066"

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(Created page with "Category:gene == Gene SJ04962 == * transcription-direction: ** positive * right-end-position: ** 347786 * left-end-position: ** 337319 * centisome-position: ** 34.93239...")
(Created page with "Category:gene == Gene SJ08066 == * transcription-direction: ** negative * right-end-position: ** 27668 * left-end-position: ** 7570 * centisome-position: ** 12.943933...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04962 ==
+
== Gene SJ08066 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 347786
+
** 27668
 
* left-end-position:
 
* left-end-position:
−
** 337319
+
** 7570
 
* centisome-position:
 
* centisome-position:
−
** 34.93239    
+
** 12.943933    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-12496]]
+
* [[4.3.1.17-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN1F-150]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15122]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN1F-151]]
+
* [[RXN-15125]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[THREDEHYD-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7591]]
+
* [[PWY-5437]]
 
** '''1''' reactions found over '''6''' reactions in the full pathway
 
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7938]]
+
* [[PWY-5826]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-7939]]
+
* [[ILEUSYN-PWY]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5943]]
+
* [[SERDEG-PWY]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3661]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5497]]
 +
** '''10''' reactions found over '''24''' reactions in the full pathway
 +
* [[PWY66-428]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=347786}}
+
{{#set: right-end-position=27668}}
−
{{#set: left-end-position=337319}}
+
{{#set: left-end-position=7570}}
−
{{#set: centisome-position=34.93239   }}
+
{{#set: centisome-position=12.943933   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:03, 18 March 2021

Gene SJ08066

  • transcription-direction:
    • negative
  • right-end-position:
    • 27668
  • left-end-position:
    • 7570
  • centisome-position:
    • 12.943933

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5437
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5826
    • 2 reactions found over 14 reactions in the full pathway
  • ILEUSYN-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • SERDEG-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-3661
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • PWY66-428
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08066&oldid=132931"