Difference between revisions of "SJ08066"

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(Created page with "Category:gene == Gene SJ04962 == * transcription-direction: ** positive * right-end-position: ** 347786 * left-end-position: ** 337319 * centisome-position: ** 34.93239...")
(Created page with "Category:gene == Gene SJ15409 == * transcription-direction: ** negative * right-end-position: ** 262226 * left-end-position: ** 252122 * centisome-position: ** 85.07174...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04962 ==
+
== Gene SJ15409 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 347786
+
** 262226
 
* left-end-position:
 
* left-end-position:
−
** 337319
+
** 252122
 
* centisome-position:
 
* centisome-position:
−
** 34.93239    
+
** 85.07174    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-12496]]
+
* [[2.4.1.223-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN1F-150]]
+
* [[2.4.1.94-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-11889]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[RXN-11890]]
−
* [[RXN1F-151]]
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15205]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7591]]
+
* [[PWY-6558]]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''7''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-7938]]
+
* [[PWY-7437]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7939]]
 
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5943]]
+
{{#set: transcription-direction=negative}}
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
{{#set: right-end-position=262226}}
−
{{#set: transcription-direction=positive}}
+
{{#set: left-end-position=252122}}
−
{{#set: right-end-position=347786}}
+
{{#set: centisome-position=85.07174   }}
−
{{#set: left-end-position=337319}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: centisome-position=34.93239   }}
+
{{#set: nb reaction associated=5}}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb reaction associated=3}}
 
−
{{#set: nb pathway associated=4}}
 

Revision as of 14:46, 5 January 2021

Gene SJ15409

  • transcription-direction:
    • negative
  • right-end-position:
    • 262226
  • left-end-position:
    • 252122
  • centisome-position:
    • 85.07174

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6558
    • 7 reactions found over 13 reactions in the full pathway
  • PWY-7437
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08066&oldid=54773"