Difference between revisions of "SJ08176"

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(Created page with "Category:gene == Gene SJ04802 == * transcription-direction: ** negative * right-end-position: ** 45217 * left-end-position: ** 39394 * centisome-position: ** 39.33264...")
(Created page with "Category:gene == Gene SJ00971 == * transcription-direction: ** positive * right-end-position: ** 103211 * left-end-position: ** 98279 * centisome-position: ** 61.839474...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04802 ==
+
== Gene SJ00971 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 45217
+
** 103211
 
* left-end-position:
 
* left-end-position:
−
** 39394
+
** 98279
 
* centisome-position:
 
* centisome-position:
−
** 39.33264    
+
** 61.839474    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GPPSYN-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[DIHYDLIPACETRANS-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[PYRUVDEH-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12508]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12583]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-1132]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-1133]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-3701]]
+
* [[RXN0-1134]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
−
* [[PWY-6383]]
+
** '''3''' reactions found over '''1''' reactions in the full pathway
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7218]]
−
* [[PWY-7410]]
+
** '''7''' reactions found over '''4''' reactions in the full pathway
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-5482]]
−
* [[PWY-7102]]
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY-5537]]
−
* [[PWY-6859]]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-6886]]
−
* [[PWY-7736]]
+
** '''8''' reactions found over '''5''' reactions in the full pathway
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-7384]]
−
* [[PWY-5122]]
+
** '''6''' reactions found over '''10''' reactions in the full pathway
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
* [[PYRUVDEHYD-PWY]]
−
* [[PWY-7141]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7659]]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7709]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5123]]
 
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7182]]
+
{{#set: transcription-direction=positive}}
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: right-end-position=103211}}
−
</div>
+
{{#set: left-end-position=98279}}
−
{{#set: transcription-direction=negative}}
+
{{#set: centisome-position=61.839474   }}
−
{{#set: right-end-position=45217}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: left-end-position=39394}}
+
{{#set: nb reaction associated=7}}
−
{{#set: centisome-position=39.33264   }}
+
{{#set: nb pathway associated=7}}
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=2}}
 
−
{{#set: nb pathway associated=11}}
 

Revision as of 14:52, 5 January 2021

Gene SJ00971

  • transcription-direction:
    • positive
  • right-end-position:
    • 103211
  • left-end-position:
    • 98279
  • centisome-position:
    • 61.839474

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLYCOLYSIS-TCA-GLYOX-BYPASS
    • 3 reactions found over 1 reactions in the full pathway
  • PWY-7218
    • 7 reactions found over 4 reactions in the full pathway
  • PWY-5482
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5537
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6886
    • 8 reactions found over 5 reactions in the full pathway
  • PWY-7384
    • 6 reactions found over 10 reactions in the full pathway
  • PYRUVDEHYD-PWY
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08176&oldid=57796"