Difference between revisions of "SJ08247"

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(Created page with "Category:gene == Gene SJ15992 == * transcription-direction: ** positive * right-end-position: ** 25427 * left-end-position: ** 17433 * centisome-position: ** 6.043619...")
(Created page with "Category:gene == Gene SJ08247 == * transcription-direction: ** positive * right-end-position: ** 18573 * left-end-position: ** 10078 * centisome-position: ** 18.003822...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ15992 ==
+
== Gene SJ08247 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 25427
+
** 18573
 
* left-end-position:
 
* left-end-position:
** 17433
+
** 10078
 
* centisome-position:
 
* centisome-position:
** 6.043619    
+
** 18.003822    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[PHOSGLYPHOS-RXN]]
+
* [[RIBOKIN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14223]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 18: Line 23:
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RIBOKIN-PWY]]
* [[PWY66-399]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[GLUCONEO-PWY]]
 
** '''12''' reactions found over '''13''' reactions in the full pathway
 
* [[P124-PWY]]
 
** '''12''' reactions found over '''15''' reactions in the full pathway
 
* [[CALVIN-PWY]]
 
** '''12''' reactions found over '''13''' reactions in the full pathway
 
* [[P185-PWY]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[P122-PWY]]
 
** '''16''' reactions found over '''18''' reactions in the full pathway
 
* [[PWY-5484]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-1042]]
 
** '''9''' reactions found over '''10''' reactions in the full pathway
 
* [[GLYCOLYSIS]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[ANAGLYCOLYSIS-PWY]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-7003]]
 
** '''8''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-6901]]
 
** '''10''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-6886]]
 
** '''8''' reactions found over '''5''' reactions in the full pathway
 
* [[SUCSYN-PWY]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=25427}}
+
{{#set: right-end-position=18573}}
{{#set: left-end-position=17433}}
+
{{#set: left-end-position=10078}}
{{#set: centisome-position=6.043619   }}
+
{{#set: centisome-position=18.003822   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:00, 18 March 2021

Gene SJ08247

  • transcription-direction:
    • positive
  • right-end-position:
    • 18573
  • left-end-position:
    • 10078
  • centisome-position:
    • 18.003822

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • RIBOKIN-PWY
    • 1 reactions found over 2 reactions in the full pathway