Difference between revisions of "SJ08355"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19070 CPD-19070] == * common-name: ** (25s)-26-hydroxycholesterol * smiles: ** cc(co)cccc(c...")
(Created page with "Category:gene == Gene SJ21179 == * transcription-direction: ** positive * right-end-position: ** 187516 * left-end-position: ** 176805 * centisome-position: ** 89.69455...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19070 CPD-19070] ==
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== Gene SJ21179 ==
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* common-name:
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* transcription-direction:
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** (25s)-26-hydroxycholesterol
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** positive
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* smiles:
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* right-end-position:
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** cc(co)cccc(c)[ch]3(cc[ch]4([ch]2(cc=c1(cc(o)ccc(c)1[ch]2ccc(c)34))))
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** 187516
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* inchi-key:
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* left-end-position:
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** fyhrjwmencaljy-vicxtrefsa-n
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** 176805
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* molecular-weight:
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* centisome-position:
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** 402.659
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** 89.69455   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-17653]]
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* [[S.japonica_sterols_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-17655]]
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* [[1.8.5.1-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(25s)-26-hydroxycholesterol}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=fyhrjwmencaljy-vicxtrefsa-n}}
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* [[GSHTRAN-RXN]]
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{{#set: molecular-weight=402.659}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[GST-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13673]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15680]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6370]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-2261]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6842]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-4061]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7112]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7533]]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=187516}}
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{{#set: left-end-position=176805}}
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{{#set: centisome-position=89.69455    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=6}}

Revision as of 20:21, 18 December 2020

Gene SJ21179

  • transcription-direction:
    • positive
  • right-end-position:
    • 187516
  • left-end-position:
    • 176805
  • centisome-position:
    • 89.69455

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6370
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-2261
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway




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