Difference between revisions of "SJ08386"

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(Created page with "Category:gene == Gene SJ02830 == * transcription-direction: ** negative * right-end-position: ** 160507 * left-end-position: ** 153349 * centisome-position: ** 28.769245...")
 
(Created page with "Category:gene == Gene SJ15785 == * transcription-direction: ** negative * right-end-position: ** 1091220 * left-end-position: ** 1080369 * centisome-position: ** 88.74141...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02830 ==
+
== Gene SJ15785 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 160507
+
** 1091220
 
* left-end-position:
 
* left-end-position:
−
** 153349
+
** 1080369
 
* centisome-position:
 
* centisome-position:
−
** 28.769245    
+
** 88.74141    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.7.8.23-RXN]]
+
* [[ERYTHRULOSE-REDUCTASE-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[23-DIMETHYLMALATE-LYASE-RXN]]
+
* [[L-XYLULOSE-REDUCTASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ISOCIT-CLEAV-RXN]]
+
* [[RXN-17773]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10827]]
+
* [[RXN-9524]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-9528]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10828]]
+
* [[RXN-9536]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5055]]
+
* [[PWY-7786]]
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6969]]
+
* [[PWY-5525]]
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[GLYOXYLATE-BYPASS]]
+
* [[PWY-5515]]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[P105-PWY]]
+
* [[PWY-5994]]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
−
* [[PWY-7769]]
+
* [[PWY-5971]]
−
** '''2''' reactions found over '''25''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
−
* [[PWY-6322]]
 
−
** '''2''' reactions found over '''25''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=160507}}
+
{{#set: right-end-position=1091220}}
−
{{#set: left-end-position=153349}}
+
{{#set: left-end-position=1080369}}
−
{{#set: centisome-position=28.769245   }}
+
{{#set: centisome-position=88.74141   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=5}}

Revision as of 14:20, 26 August 2019

Gene SJ15785

  • transcription-direction:
    • negative
  • right-end-position:
    • 1091220
  • left-end-position:
    • 1080369
  • centisome-position:
    • 88.74141

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7786
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5525
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5515
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5994
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5971
    • 31 reactions found over 31 reactions in the full pathway




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