Difference between revisions of "SJ08395"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-315 CPD-315] == * common-name: ** cyanocob(iii)alamin * smiles: ** cc4(=c(c)c=c3(n2(c%12(oc...")
(Created page with "Category:gene == Gene SJ08395 == * transcription-direction: ** positive * right-end-position: ** 48468 * left-end-position: ** 47263 * centisome-position: ** 87.276794...")
 
(7 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-315 CPD-315] ==
+
== Gene SJ08395 ==
−
* common-name:
+
* transcription-direction:
−
** cyanocob(iii)alamin
+
** positive
−
* smiles:
+
* right-end-position:
−
** cc4(=c(c)c=c3(n2(c%12(oc(co)c(op(=o)(o[ch](c)cnc(=o)ccc1(c)(c(cc(=o)n)[ch]%11(c8(c)(c(cc(=o)n)(c)c(ccc(=o)n)c7(c(c)=c%10(c(cc(=o)n)(c)c(ccc(=o)n)c9(c=c6(c(c)(c)c(ccc(=o)n)c5(c(c)=c1n([co---]([n+](=c2)c3=c4)(c#n)([n+]=56)([n+]=78)[n+]=9%10)%11)))))))))[o-])c(o)%12))))
+
** 48468
−
* inchi-key:
+
* left-end-position:
−
** rmrcnwbmxrmirw-wzhzpdafsa-l
+
** 47263
−
* molecular-weight:
+
* centisome-position:
−
** 1355.377
+
** 87.276794   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[ExchangeSeed-CPD-315]]
+
* [[S.japonica_carotenoid_curated]]
−
* [[TransportSeed-CPD-315]]
+
== Reaction(s) associated ==
−
== Reaction(s) known to produce the compound ==
+
* [[HISTIDINE-DECARBOXYLASE-RXN]]
−
* [[ExchangeSeed-CPD-315]]
+
** Category: [[annotation]]
−
* [[TransportSeed-CPD-315]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
== Reaction(s) of unknown directionality ==
+
** Category: [[orthology]]
−
{{#set: common-name=cyanocob(iii)alamin}}
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
{{#set: inchi-key=inchikey=rmrcnwbmxrmirw-wzhzpdafsa-l}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: molecular-weight=1355.377}}
+
== Pathway(s) associated ==
 +
* [[PWY-6173]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=48468}}
 +
{{#set: left-end-position=47263}}
 +
{{#set: centisome-position=87.276794    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=1}}
 +
{{#set: nb pathway associated=1}}

Latest revision as of 11:01, 18 March 2021

Gene SJ08395

  • transcription-direction:
    • positive
  • right-end-position:
    • 48468
  • left-end-position:
    • 47263
  • centisome-position:
    • 87.276794

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6173
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08395&oldid=132188"