Difference between revisions of "SJ08395"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-315 CPD-315] == * common-name: ** cyanocob(iii)alamin * smiles: ** cc4(=c(c)c=c3(n2(c%12(oc...")
(Created page with "Category:gene == Gene SJ06337 == * transcription-direction: ** positive * right-end-position: ** 170322 * left-end-position: ** 156756 * centisome-position: ** 32.728138...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-315 CPD-315] ==
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== Gene SJ06337 ==
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* common-name:
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* transcription-direction:
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** cyanocob(iii)alamin
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** positive
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* smiles:
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* right-end-position:
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** cc4(=c(c)c=c3(n2(c%12(oc(co)c(op(=o)(o[ch](c)cnc(=o)ccc1(c)(c(cc(=o)n)[ch]%11(c8(c)(c(cc(=o)n)(c)c(ccc(=o)n)c7(c(c)=c%10(c(cc(=o)n)(c)c(ccc(=o)n)c9(c=c6(c(c)(c)c(ccc(=o)n)c5(c(c)=c1n([co---]([n+](=c2)c3=c4)(c#n)([n+]=56)([n+]=78)[n+]=9%10)%11)))))))))[o-])c(o)%12))))
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** 170322
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* inchi-key:
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* left-end-position:
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** rmrcnwbmxrmirw-wzhzpdafsa-l
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** 156756
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* molecular-weight:
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* centisome-position:
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** 1355.377
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** 32.728138   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[ExchangeSeed-CPD-315]]
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* [[S.japonica_sterols_curated]]
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* [[TransportSeed-CPD-315]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[RXN-11361]]
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* [[ExchangeSeed-CPD-315]]
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** Category: [[annotation]]
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* [[TransportSeed-CPD-315]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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** Category: [[orthology]]
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{{#set: common-name=cyanocob(iii)alamin}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: inchi-key=inchikey=rmrcnwbmxrmirw-wzhzpdafsa-l}}
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* [[RXN-12473]]
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{{#set: molecular-weight=1355.377}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN0-6359]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[THIOSULFATE-SULFURTRANSFERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6823]]
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** '''7''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5350]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=170322}}
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{{#set: left-end-position=156756}}
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{{#set: centisome-position=32.728138    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=4}}
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{{#set: nb pathway associated=2}}

Revision as of 20:20, 18 December 2020

Gene SJ06337

  • transcription-direction:
    • positive
  • right-end-position:
    • 170322
  • left-end-position:
    • 156756
  • centisome-position:
    • 32.728138

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6823
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-5350
    • 1 reactions found over 1 reactions in the full pathway




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