Difference between revisions of "SJ08421"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-5170 CPD-5170] == * common-name: ** α-d-glc-(1→3)-α-d-glc-(1→3)-&alph...")
(Created page with "Category:gene == Gene SJ08421 == * transcription-direction: ** positive * right-end-position: ** 295428 * left-end-position: ** 289052 * centisome-position: ** 65.502785...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-5170 CPD-5170] ==
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== Gene SJ08421 ==
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* common-name:
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* transcription-direction:
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** α-d-glc-(1→3)-α-d-glc-(1→3)-α-d-man-(1→2)-α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→2)-α-d-man-(1→6)]-α-d-man-(1→6)]-β-d-man-(1→4)-β-d-glcnac-(1→4)-α-d-glcnac-diphosphodolichol
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** positive
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== Reaction(s) known to consume the compound ==
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* right-end-position:
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* [[RXN-5472]]
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** 295428
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== Reaction(s) known to produce the compound ==
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* left-end-position:
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* [[RXN-5471]]
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** 289052
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== Reaction(s) of unknown directionality ==
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* centisome-position:
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{{#set: common-name=α-d-glc-(1→3)-α-d-glc-(1→3)-α-d-man-(1→2)-α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→2)-α-d-man-(1→6)]-α-d-man-(1→6)]-β-d-man-(1→4)-β-d-glcnac-(1→4)-α-d-glcnac-diphosphodolichol}}
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** 65.502785   
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== Organism(s) associated with this gene  ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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* [[PEROXID-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14240]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15288]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17352]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-8635]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7214]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7445]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5466]]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6824]]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5469]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5461]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=295428}}
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{{#set: left-end-position=289052}}
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{{#set: centisome-position=65.502785    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=6}}

Latest revision as of 11:04, 18 March 2021

Gene SJ08421

  • transcription-direction:
    • positive
  • right-end-position:
    • 295428
  • left-end-position:
    • 289052
  • centisome-position:
    • 65.502785

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08421&oldid=133276"