Difference between revisions of "SJ08428"
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(Created page with "Category:gene == Gene SJ19334 == * transcription-direction: ** positive * right-end-position: ** 2089 * left-end-position: ** 98 * centisome-position: ** 4.588015 == O...") |
(Created page with "Category:gene == Gene SJ12431 == * transcription-direction: ** negative * right-end-position: ** 323433 * left-end-position: ** 304855 * centisome-position: ** 85.16407...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ12431 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 323433 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 304855 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 85.16407 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[RXN-5286]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | |
| − | + | * [[RXN1F-72]] | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | ** Category: [[ | ||
| − | *** source: [[ | ||
| − | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-5086]] |
| − | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7760]] |
| − | ** ''' | + | ** '''1''' reactions found over '''30''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7758]] |
| − | ** ''' | + | ** '''1''' reactions found over '''14''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7759]] |
| − | ** ''' | + | ** '''1''' reactions found over '''18''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-5064]] |
| − | {{#set: right-end-position= | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-5526]] |
| − | {{#set: centisome-position= | + | ** '''5''' reactions found over '''13''' reactions in the full pathway |
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=323433}} | ||
| + | {{#set: left-end-position=304855}} | ||
| + | {{#set: centisome-position=85.16407 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Revision as of 15:22, 5 January 2021
Contents
Gene SJ12431
- transcription-direction:
- negative
- right-end-position:
- 323433
- left-end-position:
- 304855
- centisome-position:
- 85.16407
Organism(s) associated with this gene
Reaction(s) associated
- RXN-5286
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: annotation
- RXN1F-72
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5086
- 2 reactions found over 2 reactions in the full pathway
- PWY-7760
- 1 reactions found over 30 reactions in the full pathway
- PWY-7758
- 1 reactions found over 14 reactions in the full pathway
- PWY-7759
- 1 reactions found over 18 reactions in the full pathway
- PWY-5064
- 5 reactions found over 5 reactions in the full pathway
- PWY-5526
- 5 reactions found over 13 reactions in the full pathway
