Difference between revisions of "SJ08454"
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(Created page with "Category:gene == Gene SJ12527 == * transcription-direction: ** positive * right-end-position: ** 351209 * left-end-position: ** 349249 * centisome-position: ** 97.62676...") |
(Created page with "Category:gene == Gene SJ21099 == * transcription-direction: ** negative * right-end-position: ** 19795 * left-end-position: ** 12060 * centisome-position: ** 6.091555...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ21099 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 19795 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 12060 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 6.091555 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[S. | + | * [[S.japonica_sterols_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| + | * [[ADENYL-KIN-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-11832]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | ** Category: [[orthology]] |
| − | {{#set: right-end-position= | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: left-end-position= | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: centisome-position= | + | * [[RXN-12002]] |
| − | {{#set: organism associated=S. | + | ** Category: [[annotation]] |
| − | {{#set: nb reaction associated= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-7913]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | </div> | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-7219]] | ||
| + | ** '''4''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-7205]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-7176]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-7197]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=19795}} | ||
| + | {{#set: left-end-position=12060}} | ||
| + | {{#set: centisome-position=6.091555 }} | ||
| + | {{#set: organism associated=S.japonica_sterols_curated}} | ||
| + | {{#set: nb reaction associated=4}} | ||
| + | {{#set: nb pathway associated=4}} | ||
Revision as of 20:28, 18 December 2020
Contents
Gene SJ21099
- transcription-direction:
- negative
- right-end-position:
- 19795
- left-end-position:
- 12060
- centisome-position:
- 6.091555
Organism(s) associated with this gene
Reaction(s) associated
- ADENYL-KIN-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-11832
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-12002
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-7913
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7219
- 4 reactions found over 3 reactions in the full pathway
- PWY-7205
- 2 reactions found over 2 reactions in the full pathway
- PWY-7176
- 3 reactions found over 3 reactions in the full pathway
- PWY-7197
- 4 reactions found over 4 reactions in the full pathway
