Difference between revisions of "SJ08467"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROSTAGLANDIN-H2 PROSTAGLANDIN-H2] == * common-name: ** prostaglandin-h2 * smiles: ** cccccc(o)...")
(Created page with "Category:gene == Gene SJ05636 == * transcription-direction: ** negative * right-end-position: ** 31071 * left-end-position: ** 2180 * centisome-position: ** 2.424485 =...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROSTAGLANDIN-H2 PROSTAGLANDIN-H2] ==
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== Gene SJ05636 ==
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* common-name:
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* transcription-direction:
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** prostaglandin-h2
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** negative
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* smiles:
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* right-end-position:
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** cccccc(o)c=cc2(c1(cc(oo1)c(cc=ccccc(=o)[o-])2))
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** 31071
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* inchi-key:
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* left-end-position:
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** yibnhajfjuqsra-ynnpmvkqsa-m
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** 2180
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* molecular-weight:
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* centisome-position:
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** 351.462
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** 2.424485   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
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* [[S.japonica_sterols_curated]]
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* [[PROSTAGLANDIN-E-SYNTHASE-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[ATPASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=prostaglandin-h2}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=yibnhajfjuqsra-ynnpmvkqsa-m}}
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** Category: [[orthology]]
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{{#set: molecular-weight=351.462}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=31071}}
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{{#set: left-end-position=2180}}
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{{#set: centisome-position=2.424485    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Revision as of 20:21, 18 December 2020

Gene SJ05636

  • transcription-direction:
    • negative
  • right-end-position:
    • 31071
  • left-end-position:
    • 2180
  • centisome-position:
    • 2.424485

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08467&oldid=41524"