Difference between revisions of "SJ08508"

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(Created page with "Category:gene == Gene SJ18666 == * transcription-direction: ** positive * right-end-position: ** 228579 * left-end-position: ** 225561 * centisome-position: ** 94.00921...")
(Created page with "Category:gene == Gene SJ08508 == * transcription-direction: ** negative * right-end-position: ** 17135 * left-end-position: ** 3818 * centisome-position: ** 7.3067575...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18666 ==
+
== Gene SJ08508 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 228579
+
** 17135
 
* left-end-position:
 
* left-end-position:
−
** 225561
+
** 3818
 
* centisome-position:
 
* centisome-position:
−
** 94.00921    
+
** 7.3067575    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PMPOXI-RXN]]
+
* [[3.1.3.16-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PNPOXI-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PYRIDOXINE-4-OXIDASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12752]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-13142]]
+
{{#set: transcription-direction=negative}}
−
** Category: [[annotation]]
+
{{#set: right-end-position=17135}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=3818}}
−
== Pathway(s) associated ==
+
{{#set: centisome-position=7.3067575   }}
−
* [[PLPSAL-PWY]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7204]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PYRIDOXSYN-PWY]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7282]]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5499]]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6938]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=228579}}
 
−
{{#set: left-end-position=225561}}
 
−
{{#set: centisome-position=94.00921   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=6}}
 

Latest revision as of 11:01, 18 March 2021

Gene SJ08508

  • transcription-direction:
    • negative
  • right-end-position:
    • 17135
  • left-end-position:
    • 3818
  • centisome-position:
    • 7.3067575

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08508&oldid=131780"