Difference between revisions of "SJ08508"

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(Created page with "Category:gene == Gene SJ18666 == * transcription-direction: ** positive * right-end-position: ** 228579 * left-end-position: ** 225561 * centisome-position: ** 94.00921...")
(Created page with "Category:gene == Gene SJ18882 == * transcription-direction: ** positive * right-end-position: ** 30604 * left-end-position: ** 8794 * centisome-position: ** 3.7520747...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ18666 ==
+
== Gene SJ18882 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 228579
+
** 30604
 
* left-end-position:
 
* left-end-position:
** 225561
+
** 8794
 
* centisome-position:
 
* centisome-position:
** 94.00921    
+
** 3.7520747    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[PMPOXI-RXN]]
+
* [[RXN-9839]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[PNPOXI-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[PYRIDOXINE-4-OXIDASE-RXN]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-12752]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-13142]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PLPSAL-PWY]]
+
* [[PWY-6082]]
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7204]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PYRIDOXSYN-PWY]]
 
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
** '''3''' reactions found over '''7''' reactions in the full pathway
* [[PWY-7282]]
+
* [[PWY-6073]]
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
* [[PWY-5499]]
 
** '''1''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6938]]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=228579}}
+
{{#set: right-end-position=30604}}
{{#set: left-end-position=225561}}
+
{{#set: left-end-position=8794}}
{{#set: centisome-position=94.00921   }}
+
{{#set: centisome-position=3.7520747   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=2}}

Revision as of 12:57, 14 January 2021

Gene SJ18882

  • transcription-direction:
    • positive
  • right-end-position:
    • 30604
  • left-end-position:
    • 8794
  • centisome-position:
    • 3.7520747

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6082
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6073
    • 3 reactions found over 3 reactions in the full pathway