Difference between revisions of "SJ08543"

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(Created page with "Category:gene == Gene SJ00085 == * transcription-direction: ** negative * right-end-position: ** 361531 * left-end-position: ** 316663 * centisome-position: ** 28.291162...")
(Created page with "Category:gene == Gene SJ20515 == * transcription-direction: ** positive * right-end-position: ** 180303 * left-end-position: ** 144813 * centisome-position: ** 69.9009...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00085 ==
+
== Gene SJ20515 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 361531
+
** 180303
 
* left-end-position:
 
* left-end-position:
−
** 316663
+
** 144813
 
* centisome-position:
 
* centisome-position:
−
** 28.291162    
+
** 69.9009    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[2.7.10.1-RXN]]
−
* [[G6PI]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN]]
+
* [[PROTEIN-KINASE-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PGIA]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PGIAh]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PGIB]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PGIBh]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PGLUCISOM-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8443]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5381]]
−
* [[PWY-6142]]
+
** '''6''' reactions found over '''11''' reactions in the full pathway
−
** '''10''' reactions found over '''13''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[SUCSYN-PWY]]
+
{{#set: right-end-position=180303}}
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
{{#set: left-end-position=144813}}
−
* [[PWY-5514]]
+
{{#set: centisome-position=69.9009   }}
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7385]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-3801]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-621]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[P122-PWY]]
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-7347]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[P341-PWY]]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5384]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5659]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[RUMP-PWY]]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6981]]
 
−
** '''4''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6992]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[UDPNAGSYN-PWY]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[P124-PWY]]
 
−
** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]]
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-622]]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5054]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7238]]
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=361531}}
 
−
{{#set: left-end-position=316663}}
 
−
{{#set: centisome-position=28.291162   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=23}}
+
{{#set: nb pathway associated=1}}

Revision as of 11:03, 15 January 2021

Gene SJ20515

  • transcription-direction:
    • positive
  • right-end-position:
    • 180303
  • left-end-position:
    • 144813
  • centisome-position:
    • 69.9009

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08543&oldid=106129"