Difference between revisions of "SJ08598"
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(Created page with "Category:gene == Gene SJ08980 == == Organism(s) associated with this gene == * S.japonica_sterols_curated == Reaction(s) associated == * ADENYL-KIN-RXN ** Categor...") |
(Created page with "Category:gene == Gene SJ02065 == * transcription-direction: ** negative * right-end-position: ** 126884 * left-end-position: ** 115573 * centisome-position: ** 81.02824...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ02065 == |
| + | * transcription-direction: | ||
| + | ** negative | ||
| + | * right-end-position: | ||
| + | ** 126884 | ||
| + | * left-end-position: | ||
| + | ** 115573 | ||
| + | * centisome-position: | ||
| + | ** 81.02824 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| + | * [[ATPASE-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | *** source: [[ | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| − | * [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| + | * [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | *** source: [[ | + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-12195]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-12196]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN0-5462]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-6147]] |
| − | ** '''4''' reactions found over '''3''' reactions in the full pathway | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7539]] |
| − | ** ''' | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
| − | {{#set: organism associated=S. | + | * [[PWY-6797]] |
| − | {{#set: nb reaction associated= | + | ** '''3''' reactions found over '''7''' reactions in the full pathway |
| − | {{#set: nb pathway associated= | + | * [[PWY-7210]] |
| + | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-7198]] | ||
| + | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-7184]] | ||
| + | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-6545]] | ||
| + | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=126884}} | ||
| + | {{#set: left-end-position=115573}} | ||
| + | {{#set: centisome-position=81.02824 }} | ||
| + | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| + | {{#set: nb reaction associated=7}} | ||
| + | {{#set: nb pathway associated=7}} | ||
Revision as of 14:48, 5 January 2021
Contents
Gene SJ02065
- transcription-direction:
- negative
- right-end-position:
- 126884
- left-end-position:
- 115573
- centisome-position:
- 81.02824
Organism(s) associated with this gene
Reaction(s) associated
- ATPASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- NUCLEOSIDE-TRIPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12195
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12196
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5462
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6147
- 5 reactions found over 5 reactions in the full pathway
- PWY-7539
- 4 reactions found over 5 reactions in the full pathway
- PWY-6797
- 3 reactions found over 7 reactions in the full pathway
- PWY-7210
- 8 reactions found over 8 reactions in the full pathway
- PWY-7198
- 6 reactions found over 7 reactions in the full pathway
- PWY-7184
- 9 reactions found over 9 reactions in the full pathway
- PWY-6545
- 8 reactions found over 9 reactions in the full pathway
