Difference between revisions of "SJ08601"
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(Created page with "Category:gene == Gene SJ22257 == * transcription-direction: ** positive * right-end-position: ** 245863 * left-end-position: ** 218531 * centisome-position: ** 37.504654...") |
(Created page with "Category:gene == Gene SJ08601 == * transcription-direction: ** negative * right-end-position: ** 712921 * left-end-position: ** 674134 * centisome-position: ** 78.49501...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ08601 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 712921 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 674134 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 78.49501 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[ACETATE--COA-LIGASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | |||
| − | |||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY66-161]] |
| − | ** ''' | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7118]] |
| − | ** ''' | + | ** '''5''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY66-162]] |
| − | {{#set: right-end-position= | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY0-1313]] |
| − | {{#set: centisome-position= | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| + | * [[PWY-6672]] | ||
| + | ** '''4''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY66-21]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=712921}} | ||
| + | {{#set: left-end-position=674134}} | ||
| + | {{#set: centisome-position=78.49501 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Latest revision as of 11:05, 18 March 2021
Contents
Gene SJ08601
- transcription-direction:
- negative
- right-end-position:
- 712921
- left-end-position:
- 674134
- centisome-position:
- 78.49501
Organism(s) associated with this gene
Reaction(s) associated
- ACETATE--COA-LIGASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY66-161
- 2 reactions found over 3 reactions in the full pathway
- PWY-7118
- 5 reactions found over 4 reactions in the full pathway
- PWY66-162
- 3 reactions found over 3 reactions in the full pathway
- PWY0-1313
- 1 reactions found over 1 reactions in the full pathway
- PWY-6672
- 4 reactions found over 9 reactions in the full pathway
- PWY66-21
- 3 reactions found over 3 reactions in the full pathway
