Difference between revisions of "SJ08601"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ07056 == * transcription-direction: ** negative * right-end-position: ** 58834 * left-end-position: ** 52308 * centisome-position: ** 73.3324 =...")
(Created page with "Category:gene == Gene SJ08601 == * transcription-direction: ** negative * right-end-position: ** 712921 * left-end-position: ** 674134 * centisome-position: ** 78.49501...")
 
(8 intermediate revisions by 4 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07056 ==
+
== Gene SJ08601 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 58834
+
** 712921
 
* left-end-position:
 
* left-end-position:
−
** 52308
+
** 674134
 
* centisome-position:
 
* centisome-position:
−
** 73.3324    
+
** 78.49501    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ACETATE--COA-LIGASE-RXN]]
−
* [[PEROXID-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-14240]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15288]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-17352]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-8635]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
* [[PWY66-161]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7445]]
+
* [[PWY-7118]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5466]]
+
* [[PWY66-162]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6824]]
+
* [[PWY0-1313]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5469]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5461]]
 
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6672]]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY66-21]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=58834}}
+
{{#set: right-end-position=712921}}
−
{{#set: left-end-position=52308}}
+
{{#set: left-end-position=674134}}
−
{{#set: centisome-position=73.3324   }}
+
{{#set: centisome-position=78.49501   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=1}}
 
{{#set: nb pathway associated=6}}
 
{{#set: nb pathway associated=6}}

Latest revision as of 11:05, 18 March 2021

Gene SJ08601

  • transcription-direction:
    • negative
  • right-end-position:
    • 712921
  • left-end-position:
    • 674134
  • centisome-position:
    • 78.49501

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-161
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7118
    • 5 reactions found over 4 reactions in the full pathway
  • PWY66-162
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-1313
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6672
    • 4 reactions found over 9 reactions in the full pathway
  • PWY66-21
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08601&oldid=134081"