Difference between revisions of "SJ08624"

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(Created page with "Category:gene == Gene SJ15310 == * transcription-direction: ** negative * right-end-position: ** 38904 * left-end-position: ** 31325 * centisome-position: ** 10.508008...")
(Created page with "Category:gene == Gene SJ08624 == * transcription-direction: ** positive * right-end-position: ** 293242 * left-end-position: ** 278413 * centisome-position: ** 63.916294...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ15310 ==
+
== Gene SJ08624 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 38904
+
** 293242
 
* left-end-position:
 
* left-end-position:
** 31325
+
** 278413
 
* centisome-position:
 
* centisome-position:
** 10.508008    
+
** 63.916294    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[NADH-DEHYDROG-A-RXN]]
+
* [[GUANYL-KIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[NADH-DEHYDROGENASE-QUINONE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[NADH-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-5330]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7221]]
* [[PWY0-1335]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-4302]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-3781]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY0-1334]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6692]]
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-5083]]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-7279]]
 
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
* [[PWY0-1573]]
+
{{#set: transcription-direction=positive}}
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: right-end-position=293242}}
* [[PWY-7269]]
+
{{#set: left-end-position=278413}}
** '''5''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=63.916294   }}
* [[PWY0-1568]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY0-1567]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=38904}}
 
{{#set: left-end-position=31325}}
 
{{#set: centisome-position=10.508008   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:02, 18 March 2021

Gene SJ08624

  • transcription-direction:
    • positive
  • right-end-position:
    • 293242
  • left-end-position:
    • 278413
  • centisome-position:
    • 63.916294

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7221
    • 4 reactions found over 4 reactions in the full pathway