Difference between revisions of "SJ08677"

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(Created page with "Category:gene == Gene SJ21389 == * transcription-direction: ** positive * right-end-position: ** 75058 * left-end-position: ** 64341 * centisome-position: ** 33.183937...")
(Created page with "Category:gene == Gene SJ08677 == * transcription-direction: ** negative * right-end-position: ** 10657 * left-end-position: ** 4563 * centisome-position: ** 8.991133 =...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21389 ==
+
== Gene SJ08677 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 75058
+
** 10657
 
* left-end-position:
 
* left-end-position:
−
** 64341
+
** 4563
 
* centisome-position:
 
* centisome-position:
−
** 33.183937    
+
** 8.991133    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[N-ACETYLGLUTPREDUCT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-11277]]
+
* [[RXN-15006]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16030]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16121]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17730]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[TRIGLSYN-PWY]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-5097]]
−
* [[PWY-7039]]
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-6559]]
−
* [[PWY-6453]]
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
* [[P101-PWY]]
−
* [[PWY-7782]]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
** '''11''' reactions found over '''16''' reactions in the full pathway
+
* [[DAPLYSINESYN-PWY]]
−
{{#set: transcription-direction=positive}}
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
{{#set: right-end-position=75058}}
+
* [[PWY-2941]]
−
{{#set: left-end-position=64341}}
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
{{#set: centisome-position=33.183937   }}
+
* [[PWY-2942]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6562]]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7153]]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[HOMOSERSYN-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5154]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[GLUTORN-PWY]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[ARGSYNBSUB-PWY]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7400]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=10657}}
 +
{{#set: left-end-position=4563}}
 +
{{#set: centisome-position=8.991133   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=13}}

Latest revision as of 11:04, 18 March 2021

Gene SJ08677

  • transcription-direction:
    • negative
  • right-end-position:
    • 10657
  • left-end-position:
    • 4563
  • centisome-position:
    • 8.991133

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5097
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6559
    • 2 reactions found over 4 reactions in the full pathway
  • P101-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • DAPLYSINESYN-PWY
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-2941
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-2942
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6562
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7153
    • 4 reactions found over 8 reactions in the full pathway
  • HOMOSERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5154
    • 8 reactions found over 9 reactions in the full pathway
  • GLUTORN-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7400
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08677&oldid=133242"