Difference between revisions of "SJ08769"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-458 CPD-458] == * common-name: ** galactinol * smiles: ** c(c1(oc(c(c(c1o)o)o)oc2(c(c(c(c(c...")
(Created page with "Category:gene == Gene SJ08769 == * transcription-direction: ** positive * right-end-position: ** 416917 * left-end-position: ** 403567 * centisome-position: ** 93.4477...")
 
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-458 CPD-458] ==
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== Gene SJ08769 ==
* common-name:
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* transcription-direction:
** galactinol
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** positive
* smiles:
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* right-end-position:
** c(c1(oc(c(c(c1o)o)o)oc2(c(c(c(c(c2o)o)o)o)o)))o
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** 416917
* inchi-key:
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* left-end-position:
** vcwmrqdbpzkxkg-xidcdeprsa-n
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** 403567
* molecular-weight:
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* centisome-position:
** 342.299
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** 93.4477   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[2.4.1.67-RXN]]
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* [[S.japonica_carotenoid_curated]]
* [[2.4.1.82-RXN]]
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== Reaction(s) associated ==
* [[RXN-8281]]
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* [[ATPASE-RXN]]
== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
* [[2.4.1.123-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[2.4.1.67-RXN]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
{{#set: common-name=galactinol}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: inchi-key=inchikey=vcwmrqdbpzkxkg-xidcdeprsa-n}}
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* [[RXN-12195]]
{{#set: molecular-weight=342.299}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=416917}}
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{{#set: left-end-position=403567}}
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{{#set: centisome-position=93.4477    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:03, 18 March 2021

Gene SJ08769

  • transcription-direction:
    • positive
  • right-end-position:
    • 416917
  • left-end-position:
    • 403567
  • centisome-position:
    • 93.4477

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway