Difference between revisions of "SJ08796"
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(Created page with "Category:gene == Gene SJ15409 == * transcription-direction: ** negative * right-end-position: ** 262226 * left-end-position: ** 252122 * centisome-position: ** 85.07174...") |
(Created page with "Category:gene == Gene SJ15069 == * transcription-direction: ** positive * right-end-position: ** 168145 * left-end-position: ** 156447 * centisome-position: ** 51.66268...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ15069 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 168145 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 156447 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 51.66268 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[MANNPISOM-RXN]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-3861]] |
| − | ** '''7''' reactions found over ''' | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-5659]] |
| − | ** '''1''' reactions found over ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-7586]] |
| − | {{#set: right-end-position= | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-7456]] |
| − | {{#set: centisome-position= | + | ** '''2''' reactions found over '''7''' reactions in the full pathway |
| − | {{#set: organism associated=S. | + | * [[PWY-6992]] |
| − | {{#set: nb reaction associated= | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
| − | {{#set: nb pathway associated= | + | * [[PWY-882]] |
| + | ** '''6''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-3881]] | ||
| + | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[MANNCAT-PWY]] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=168145}} | ||
| + | {{#set: left-end-position=156447}} | ||
| + | {{#set: centisome-position=51.66268 }} | ||
| + | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| + | {{#set: nb reaction associated=1}} | ||
| + | {{#set: nb pathway associated=8}} | ||
Revision as of 14:46, 5 January 2021
Contents
Gene SJ15069
- transcription-direction:
- positive
- right-end-position:
- 168145
- left-end-position:
- 156447
- centisome-position:
- 51.66268
Organism(s) associated with this gene
Reaction(s) associated
- MANNPISOM-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-3861
- 2 reactions found over 4 reactions in the full pathway
- PWY-5659
- 3 reactions found over 4 reactions in the full pathway
- PWY-7586
- 2 reactions found over 3 reactions in the full pathway
- PWY-7456
- 2 reactions found over 7 reactions in the full pathway
- PWY-6992
- 4 reactions found over 5 reactions in the full pathway
- PWY-882
- 6 reactions found over 8 reactions in the full pathway
- PWY-3881
- 2 reactions found over 3 reactions in the full pathway
- MANNCAT-PWY
- 1 reactions found over 1 reactions in the full pathway
