Difference between revisions of "SJ08883"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROPIONYL-COA PROPIONYL-COA] == * common-name: ** propanoyl-coa * smiles: ** ccc(=o)sccnc(=o)cc...")
 
(Created page with "Category:gene == Gene SJ08883 == * transcription-direction: ** negative * right-end-position: ** 150553 * left-end-position: ** 135927 * centisome-position: ** 31.587204...")
 
(9 intermediate revisions by 4 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROPIONYL-COA PROPIONYL-COA] ==
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== Gene SJ08883 ==
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* common-name:
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* transcription-direction:
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** propanoyl-coa
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** negative
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* smiles:
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* right-end-position:
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** ccc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** 150553
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* inchi-key:
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* left-end-position:
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** qaqrevbbadehpa-iexphmlfsa-j
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** 135927
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* molecular-weight:
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* centisome-position:
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** 819.566
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** 31.587204   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[METHYLACETOACETYLCOATHIOL-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[METHYLMALONYL-COA-DECARBOXYLASE-RXN]]
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== Reaction(s) associated ==
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* [[PPCOAOm]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PROPIONYL-COA-CARBOXY-RXN]]
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* [[ADENYLATECYC-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[orthology]]
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* [[1.2.1.27-RXN]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[2.3.1.176-RXN]]
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* [[ATPASE-RXN]]
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* [[ACCAT]]
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** Category: [[annotation]]
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* [[METHYLACETOACETYLCOATHIOL-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[METHYLMALONYL-COA-DECARBOXYLASE-RXN]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[PPCOAOm]]
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** Category: [[annotation]]
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* [[PROPIONYL-COA-CARBOXY-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-11213]]
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* [[RXN-12195]]
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* [[RXN-12561]]
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** Category: [[annotation]]
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* [[RXN-7790]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[RXN-12196]]
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{{#set: common-name=propanoyl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=qaqrevbbadehpa-iexphmlfsa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=819.566}}
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[THIAMIN-TRIPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7369]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=150553}}
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{{#set: left-end-position=135927}}
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{{#set: centisome-position=31.587204    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=7}}
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{{#set: nb pathway associated=5}}

Latest revision as of 11:03, 18 March 2021

Gene SJ08883

  • transcription-direction:
    • negative
  • right-end-position:
    • 150553
  • left-end-position:
    • 135927
  • centisome-position:
    • 31.587204

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7369
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08883&oldid=133179"