Difference between revisions of "SJ08891"

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(Created page with "Category:gene == Gene SJ21798 == * transcription-direction: ** negative * right-end-position: ** 41506 * left-end-position: ** 24465 * centisome-position: ** 4.1395726...")
(Created page with "Category:gene == Gene SJ08891 == * transcription-direction: ** positive * right-end-position: ** 5585 * left-end-position: ** 256 * centisome-position: ** 0.5415926 ==...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21798 ==
+
== Gene SJ08891 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 41506
+
** 5585
 
* left-end-position:
 
* left-end-position:
−
** 24465
+
** 256
 
* centisome-position:
 
* centisome-position:
−
** 4.1395726    
+
** 0.5415926    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PPPGO]]
+
* [[RXN-11355]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PROTOPORGENOXI-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-12243]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17517]]
+
* [[RXN-12244]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7159]]
+
* [[PWY-6475]]
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY0-1415]]
+
{{#set: transcription-direction=positive}}
−
** '''5''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=5585}}
−
* [[CHLOROPHYLL-SYN]]
+
{{#set: left-end-position=256}}
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=0.5415926   }}
−
* [[HEME-BIOSYNTHESIS-II]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7766]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=41506}}
 
−
{{#set: left-end-position=24465}}
 
−
{{#set: centisome-position=4.1395726   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=3}}
 
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:07, 18 March 2021

Gene SJ08891

  • transcription-direction:
    • positive
  • right-end-position:
    • 5585
  • left-end-position:
    • 256
  • centisome-position:
    • 0.5415926

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6475
    • 8 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08891&oldid=135075"