Difference between revisions of "SJ08903"

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(Created page with "Category:gene == Gene SJ09890 == * transcription-direction: ** positive * right-end-position: ** 61381 * left-end-position: ** 33959 * centisome-position: ** 8.395822...")
(Created page with "Category:gene == Gene SJ05827 == * transcription-direction: ** positive * right-end-position: ** 320988 * left-end-position: ** 286400 * centisome-position: ** 58.91719...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09890 ==
+
== Gene SJ05827 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 61381
+
** 320988
 
* left-end-position:
 
* left-end-position:
−
** 33959
+
** 286400
 
* centisome-position:
 
* centisome-position:
−
** 8.395822    
+
** 58.91719    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[N-ACETYLTRANSFER-RXN]]
−
* [[ADENYLYLSULFKIN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[INORGPYROPHOSPHAT-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12720]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[SULFATE-ADENYLYLTRANS-RXN]]
+
* [[RXN0-6948]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5340]]
+
* [[PWY-5154]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7805]]
+
* [[ARGSYNBSUB-PWY]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7807]]
+
* [[GLUTORN-PWY]]
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6932]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5278]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[DISSULFRED-PWY]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[P224-PWY]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6683]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[SULFMETII-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=61381}}
+
{{#set: right-end-position=320988}}
−
{{#set: left-end-position=33959}}
+
{{#set: left-end-position=286400}}
−
{{#set: centisome-position=8.395822   }}
+
{{#set: centisome-position=58.91719   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=3}}

Revision as of 09:26, 27 August 2019

Gene SJ05827

  • transcription-direction:
    • positive
  • right-end-position:
    • 320988
  • left-end-position:
    • 286400
  • centisome-position:
    • 58.91719

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5154
    • 8 reactions found over 9 reactions in the full pathway
  • ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • GLUTORN-PWY
    • 5 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08903&oldid=30738"