Difference between revisions of "SJ08908"
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(Created page with "Category:gene == Gene SJ17660 == * transcription-direction: ** positive * right-end-position: ** 379140 * left-end-position: ** 370980 * centisome-position: ** 55.504936...") |
(Created page with "Category:gene == Gene SJ20484 == * transcription-direction: ** negative * right-end-position: ** 361730 * left-end-position: ** 349172 * centisome-position: ** 56.498222...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ20484 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 361730 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 349172 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 56.498222 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| + | * [[ATPASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-12195]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-12196]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN0-5462]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[VALINE--TRNA-LIGASE-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7210]] |
| − | ** '''7''' reactions found over '''9''' reactions in the full pathway | + | ** '''8''' reactions found over '''8''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-7198]] |
| − | {{#set: right-end-position= | + | ** '''6''' reactions found over '''7''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-7184]] |
| − | {{#set: centisome-position= | + | ** '''9''' reactions found over '''9''' reactions in the full pathway |
| + | * [[PWY-6545]] | ||
| + | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[TRNA-CHARGING-PWY]] | ||
| + | ** '''21''' reactions found over '''21''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=361730}} | ||
| + | {{#set: left-end-position=349172}} | ||
| + | {{#set: centisome-position=56.498222 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=6}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
Revision as of 09:25, 27 August 2019
Contents
Gene SJ20484
- transcription-direction:
- negative
- right-end-position:
- 361730
- left-end-position:
- 349172
- centisome-position:
- 56.498222
Organism(s) associated with this gene
Reaction(s) associated
- ATPASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- NUCLEOSIDE-TRIPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12195
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12196
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5462
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- VALINE--TRNA-LIGASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7210
- 8 reactions found over 8 reactions in the full pathway
- PWY-7198
- 6 reactions found over 7 reactions in the full pathway
- PWY-7184
- 9 reactions found over 9 reactions in the full pathway
- PWY-6545
- 8 reactions found over 9 reactions in the full pathway
- TRNA-CHARGING-PWY
- 21 reactions found over 21 reactions in the full pathway
