Difference between revisions of "SJ08914"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=RETINAL RETINAL] == * common-name: ** all-trans-retinal * smiles: ** cc(c=cc1(c(c)(c)cccc(c)=1)...")
(Created page with "Category:gene == Gene SJ05891 == * transcription-direction: ** positive * right-end-position: ** 391942 * left-end-position: ** 387332 * centisome-position: ** 79.93017...")
Line 1: Line 1:
[[Category:metabolite]]
+
[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=RETINAL RETINAL] ==
+
== Gene SJ05891 ==
* common-name:
+
* transcription-direction:
** all-trans-retinal
+
** positive
* smiles:
+
* right-end-position:
** cc(c=cc1(c(c)(c)cccc(c)=1))=cc=cc(c)=c[ch]=o
+
** 391942
* inchi-key:
+
* left-end-position:
** ncycyzxnizjoki-ovsjkpmpsa-n
+
** 387332
* molecular-weight:
+
* centisome-position:
** 284.441
+
** 79.93017   
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
* [[RETINOL-DEHYDROGENASE-RXN]]
+
* [[S.japonica_sterols_curated]]
* [[RXN-10841]]
+
== Reaction(s) associated ==
== Reaction(s) known to produce the compound ==
+
* [[ADENOSINE-KINASE-RXN]]
* [[RETINOL-DEHYDROGENASE-RXN]]
+
** Category: [[annotation]]
* [[RXN-10841]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-11783]]
+
** Category: [[orthology]]
== Reaction(s) of unknown directionality ==
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
{{#set: common-name=all-trans-retinal}}
+
* [[ADNK]]
{{#set: inchi-key=inchikey=ncycyzxnizjoki-ovsjkpmpsa-n}}
+
** Category: [[orthology]]
{{#set: molecular-weight=284.441}}
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ADNKm]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6619]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=391942}}
 +
{{#set: left-end-position=387332}}
 +
{{#set: centisome-position=79.93017    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=1}}

Revision as of 20:22, 18 December 2020

Gene SJ05891

  • transcription-direction:
    • positive
  • right-end-position:
    • 391942
  • left-end-position:
    • 387332
  • centisome-position:
    • 79.93017

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6619
    • 1 reactions found over 1 reactions in the full pathway