Difference between revisions of "SJ08942"

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(Created page with "Category:gene == Gene SJ19505 == * transcription-direction: ** negative * right-end-position: ** 68159 * left-end-position: ** 61634 * centisome-position: ** 27.310108...")
(Created page with "Category:gene == Gene SJ08942 == * transcription-direction: ** positive * right-end-position: ** 236598 * left-end-position: ** 233459 * centisome-position: ** 54.47992...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19505 ==
+
== Gene SJ08942 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 68159
+
** 236598
 
* left-end-position:
 
* left-end-position:
−
** 61634
+
** 233459
 
* centisome-position:
 
* centisome-position:
−
** 27.310108    
+
** 54.47992    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[OXALATE-DECARBOXYLASE-RXN]]
−
* [[RXN-11056]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-11057]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-13064]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15029]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17334]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17335]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17625]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-17627]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-8630]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-8872]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN66-146]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN66-161]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN66-163]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN66-169]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN66-181]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[UNSPECIFIC-MONOOXYGENASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6698]]
−
* [[PWY-6398]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-6992]]
+
{{#set: right-end-position=236598}}
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
{{#set: left-end-position=233459}}
−
* [[PWY-7407]]
+
{{#set: centisome-position=54.47992   }}
−
** '''2''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-5451]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7466]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5665]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7826]]
 
−
** '''2''' reactions found over '''25''' reactions in the full pathway
 
−
* [[PWY66-201]]
 
−
** '''3''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY66-221]]
 
−
** '''5''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY66-241]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=68159}}
 
−
{{#set: left-end-position=61634}}
 
−
{{#set: centisome-position=27.310108   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=16}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:05, 18 March 2021

Gene SJ08942

  • transcription-direction:
    • positive
  • right-end-position:
    • 236598
  • left-end-position:
    • 233459
  • centisome-position:
    • 54.47992

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6698
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08942&oldid=133769"