Difference between revisions of "SJ08998"
Jump to navigation
Jump to search
(Created page with "Category:gene == Gene SJ14303 == * transcription-direction: ** positive * right-end-position: ** 304644 * left-end-position: ** 286356 * centisome-position: ** 89.0405...") |
(Created page with "Category:gene == Gene SJ08998 == * transcription-direction: ** negative * right-end-position: ** 713587 * left-end-position: ** 707773 * centisome-position: ** 86.16415...") |
||
(5 intermediate revisions by 2 users not shown) | |||
Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ08998 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 713587 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 707773 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 86.16415 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[DCTP-PYROPHOSPHATASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[DUTP-PYROP-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN | + | * [[FAD-PYROPHOSPHATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN | + | * [[NUCLEOTIDE-PYROPHOSPHATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-14139]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[RXN-14140]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN0-1441]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN0-383]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN0-384]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN0-385]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN0-5107]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN0-6382]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-7206]] |
− | ** ''' | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-7187]] |
** '''6''' reactions found over '''7''' reactions in the full pathway | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY0-166]] | ||
+ | ** '''14''' reactions found over '''13''' reactions in the full pathway | ||
* [[PWY-7184]] | * [[PWY-7184]] | ||
** '''9''' reactions found over '''9''' reactions in the full pathway | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
* [[PWY-6545]] | * [[PWY-6545]] | ||
** '''8''' reactions found over '''9''' reactions in the full pathway | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
− | {{#set: transcription-direction= | + | * [[PWY-7821]] |
− | {{#set: right-end-position= | + | ** '''2''' reactions found over '''9''' reactions in the full pathway |
− | {{#set: left-end-position= | + | {{#set: transcription-direction=negative}} |
− | {{#set: centisome-position= | + | {{#set: right-end-position=713587}} |
+ | {{#set: left-end-position=707773}} | ||
+ | {{#set: centisome-position=86.16415 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=12}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Latest revision as of 11:07, 18 March 2021
Contents
Gene SJ08998
- transcription-direction:
- negative
- right-end-position:
- 713587
- left-end-position:
- 707773
- centisome-position:
- 86.16415
Organism(s) associated with this gene
Reaction(s) associated
- DCTP-PYROPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- DUTP-PYROP-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- FAD-PYROPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- NUCLEOTIDE-PYROPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14139
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14140
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-1441
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-383
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-384
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-385
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5107
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-6382
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7206
- 2 reactions found over 3 reactions in the full pathway
- PWY-7187
- 6 reactions found over 7 reactions in the full pathway
- PWY0-166
- 14 reactions found over 13 reactions in the full pathway
- PWY-7184
- 9 reactions found over 9 reactions in the full pathway
- PWY-6545
- 8 reactions found over 9 reactions in the full pathway
- PWY-7821
- 2 reactions found over 9 reactions in the full pathway