Difference between revisions of "SJ09024"
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(Created page with "Category:gene == Gene SJ12982 == * transcription-direction: ** positive * right-end-position: ** 332456 * left-end-position: ** 315866 * centisome-position: ** 42.640858...") |
(Created page with "Category:gene == Gene SJ18864 == * transcription-direction: ** negative * right-end-position: ** 109177 * left-end-position: ** 101374 * centisome-position: ** 43.13732...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ18864 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 109177 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 101374 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 43.13732 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[HYDROG-RXN]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** source: [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | * [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| + | * [[NADH-DEHYDROGENASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-6785]] |
| − | ** '''2''' reactions found over ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6780]] |
| − | ** ''' | + | ** '''1''' reactions found over '''2''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-6759]] |
| − | {{#set: right-end-position= | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[GLUDEG-II-PWY]] |
| − | {{#set: centisome-position= | + | ** '''3''' reactions found over '''2''' reactions in the full pathway |
| + | * [[PWY4LZ-257]] | ||
| + | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=109177}} | ||
| + | {{#set: left-end-position=101374}} | ||
| + | {{#set: centisome-position=43.13732 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=2}} | {{#set: nb reaction associated=2}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
Revision as of 11:11, 15 January 2021
Contents
Gene SJ18864
- transcription-direction:
- negative
- right-end-position:
- 109177
- left-end-position:
- 101374
- centisome-position:
- 43.13732
Organism(s) associated with this gene
Reaction(s) associated
- HYDROG-RXN
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- NADH-DEHYDROGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6785
- 1 reactions found over 1 reactions in the full pathway
- PWY-6780
- 1 reactions found over 2 reactions in the full pathway
- PWY-6759
- 1 reactions found over 1 reactions in the full pathway
- GLUDEG-II-PWY
- 3 reactions found over 2 reactions in the full pathway
- PWY4LZ-257
- 7 reactions found over 7 reactions in the full pathway
