Difference between revisions of "SJ09024"
Jump to navigation
Jump to search
(Created page with "Category:gene == Gene SJ18864 == * transcription-direction: ** negative * right-end-position: ** 109177 * left-end-position: ** 101374 * centisome-position: ** 43.13732...") |
(Created page with "Category:gene == Gene SJ09024 == * transcription-direction: ** positive * right-end-position: ** 318107 * left-end-position: ** 305716 * centisome-position: ** 71.51753...") |
||
| (One intermediate revision by one other user not shown) | |||
| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ09024 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 318107 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 305716 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 71.51753 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[MYO-INOSITOL-2-DEHYDROGENASE-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[RXN-14148]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-5940]] |
| − | ** ''' | + | ** '''2''' reactions found over '''18''' reactions in the full pathway |
| − | * [[PWY | + | * [[P562-PWY]] |
| − | ** ''' | + | ** '''2''' reactions found over '''7''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7241]] |
| − | ** '''1''' reactions found over ''' | + | ** '''1''' reactions found over '''5''' reactions in the full pathway |
| − | * [[ | + | * [[PWY-7237]] |
| − | + | ** '''4''' reactions found over '''4''' reactions in the full pathway | |
| − | + | {{#set: transcription-direction=positive}} | |
| − | ** ''' | + | {{#set: right-end-position=318107}} |
| − | {{#set: transcription-direction= | + | {{#set: left-end-position=305716}} |
| − | {{#set: right-end-position= | + | {{#set: centisome-position=71.51753 }} |
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=2}} | {{#set: nb reaction associated=2}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Latest revision as of 11:10, 18 March 2021
Contents
Gene SJ09024
- transcription-direction:
- positive
- right-end-position:
- 318107
- left-end-position:
- 305716
- centisome-position:
- 71.51753
Organism(s) associated with this gene
Reaction(s) associated
- MYO-INOSITOL-2-DEHYDROGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-14148
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5940
- 2 reactions found over 18 reactions in the full pathway
- P562-PWY
- 2 reactions found over 7 reactions in the full pathway
- PWY-7241
- 1 reactions found over 5 reactions in the full pathway
- PWY-7237
- 4 reactions found over 4 reactions in the full pathway
