Difference between revisions of "SJ09043"

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(Created page with "Category:gene == Gene SJ15530 == * transcription-direction: ** positive * right-end-position: ** 154379 * left-end-position: ** 143447 * centisome-position: ** 48.79 =...")
(Created page with "Category:gene == Gene SJ13742 == * transcription-direction: ** negative * right-end-position: ** 578540 * left-end-position: ** 487295 * centisome-position: ** 66.96207...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15530 ==
+
== Gene SJ13742 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 154379
+
** 578540
 
* left-end-position:
 
* left-end-position:
−
** 143447
+
** 487295
 
* centisome-position:
 
* centisome-position:
−
** 48.79    
+
** 66.96207    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GLYOHMETRANS-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ATPASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15561]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7210]]
−
* [[1CMET2-PWY]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6545]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5497]]
+
* [[PWY-7511]]
−
** '''10''' reactions found over '''24''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-181]]
+
{{#set: transcription-direction=negative}}
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=578540}}
−
* [[PWY-3661]]
+
{{#set: left-end-position=487295}}
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
{{#set: centisome-position=66.96207   }}
−
* [[PWY-2201]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
{{#set: nb reaction associated=7}}
−
* [[GLYSYN-PWY]]
+
{{#set: nb pathway associated=5}}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-3661-1]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-1622]]
 
−
** '''6''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-3841]]
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-2161]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=154379}}
 
−
{{#set: left-end-position=143447}}
 
−
{{#set: centisome-position=48.79   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=1}}
 
−
{{#set: nb pathway associated=10}}
 

Revision as of 14:49, 5 January 2021

Gene SJ13742

  • transcription-direction:
    • negative
  • right-end-position:
    • 578540
  • left-end-position:
    • 487295
  • centisome-position:
    • 66.96207

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09043&oldid=56604"