Difference between revisions of "SJ09063"

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(Created page with "Category:gene == Gene SJ15203 == * transcription-direction: ** negative * right-end-position: ** 168210 * left-end-position: ** 162949 * centisome-position: ** 54.217297...")
(Created page with "Category:gene == Gene SJ09063 == * transcription-direction: ** positive * right-end-position: ** 40269 * left-end-position: ** 4662 * centisome-position: ** 10.215172...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15203 ==
+
== Gene SJ09063 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 168210
+
** 40269
 
* left-end-position:
 
* left-end-position:
−
** 162949
+
** 4662
 
* centisome-position:
 
* centisome-position:
−
** 54.217297    
+
** 10.215172    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[IDI]]
+
* [[2.7.10.1-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[IPPISOM-RXN]]
+
* [[2.7.11.25-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[2.7.12.1-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PROTEIN-KINASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14906]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8443]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5381]]
−
* [[PWY-5123]]
+
** '''6''' reactions found over '''11''' reactions in the full pathway
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[NONMEVIPP-PWY]]
+
{{#set: right-end-position=40269}}
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
{{#set: left-end-position=4662}}
−
* [[PWY-6383]]
+
{{#set: centisome-position=10.215172   }}
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6174]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7560]]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7524]]
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7391]]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-922]]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7102]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6859]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=168210}}
 
−
{{#set: left-end-position=162949}}
 
−
{{#set: centisome-position=54.217297   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:02, 18 March 2021

Gene SJ09063

  • transcription-direction:
    • positive
  • right-end-position:
    • 40269
  • left-end-position:
    • 4662
  • centisome-position:
    • 10.215172

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09063&oldid=132361"