Difference between revisions of "SJ09078"

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(Created page with "Category:gene == Gene SJ13300 == * transcription-direction: ** negative * right-end-position: ** 180413 * left-end-position: ** 155939 * centisome-position: ** 45.459686...")
(Created page with "Category:gene == Gene SJ09078 == * transcription-direction: ** positive * right-end-position: ** 138596 * left-end-position: ** 113570 * centisome-position: ** 26.651243...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13300 ==
+
== Gene SJ09078 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 180413
+
** 138596
 
* left-end-position:
 
* left-end-position:
−
** 155939
+
** 113570
 
* centisome-position:
 
* centisome-position:
−
** 45.459686    
+
** 26.651243    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
+
* [[ATPASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY3DJ-12]]
+
* [[PWY-6545]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[SPHINGOLIPID-SYN-PWY]]
+
* [[PWY-7210]]
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5129]]
+
* [[PWY-7198]]
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7184]]
−
{{#set: right-end-position=180413}}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=155939}}
+
{{#set: transcription-direction=positive}}
−
{{#set: centisome-position=45.459686   }}
+
{{#set: right-end-position=138596}}
 +
{{#set: left-end-position=113570}}
 +
{{#set: centisome-position=26.651243   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:09, 18 March 2021

Gene SJ09078

  • transcription-direction:
    • positive
  • right-end-position:
    • 138596
  • left-end-position:
    • 113570
  • centisome-position:
    • 26.651243

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09078&oldid=135730"