Difference between revisions of "SJ09098"

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(Created page with "Category:gene == Gene SJ10955 == * transcription-direction: ** positive * right-end-position: ** 259985 * left-end-position: ** 236970 * centisome-position: ** 16.405224...")
(Created page with "Category:gene == Gene SJ09098 == * transcription-direction: ** negative * right-end-position: ** 44883 * left-end-position: ** 36775 * centisome-position: ** 81.247375...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ10955 ==
+
== Gene SJ09098 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 259985
+
** 44883
 
* left-end-position:
 
* left-end-position:
** 236970
+
** 36775
 
* centisome-position:
 
* centisome-position:
** 16.405224    
+
** 81.247375    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[CYSTEINE--TRNA-LIGASE-RXN]]
* [[RXN-15122]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN0-2381]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN0-2382]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[THREDEHYD-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[TRYPSYN-RXN]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-5437]]
+
* [[TRNA-CHARGING-PWY]]
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
* [[PWY-5826]]
+
{{#set: transcription-direction=negative}}
** '''2''' reactions found over '''14''' reactions in the full pathway
+
{{#set: right-end-position=44883}}
* [[ILEUSYN-PWY]]
+
{{#set: left-end-position=36775}}
** '''4''' reactions found over '''7''' reactions in the full pathway
+
{{#set: centisome-position=81.247375   }}
* [[PWY-6949]]
 
** '''1''' reactions found over '''6''' reactions in the full pathway
 
* [[TRPSYN-PWY]]
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY66-428]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=259985}}
 
{{#set: left-end-position=236970}}
 
{{#set: centisome-position=16.405224   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:03, 18 March 2021

Gene SJ09098

  • transcription-direction:
    • negative
  • right-end-position:
    • 44883
  • left-end-position:
    • 36775
  • centisome-position:
    • 81.247375

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated