Difference between revisions of "SJ09108"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-5167 CPD-5167] == * common-name: ** α-d-man-a-(1→2)-α-d-man-(1→2)-&al...")
(Created page with "Category:gene == Gene SJ18882 == * transcription-direction: ** positive * right-end-position: ** 30604 * left-end-position: ** 8794 * centisome-position: ** 3.7520747...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-5167 CPD-5167] ==
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== Gene SJ18882 ==
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* common-name:
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* transcription-direction:
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** α-d-man-a-(1→2)-α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→6)]-α-d-man-(1→6)]-β-d-man-(1→4)-β-d-glcnac-(1→4)-α-d-glcnac-diphosphodolichol
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** positive
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== Reaction(s) known to consume the compound ==
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* right-end-position:
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* [[RXN-5469]]
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** 30604
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== Reaction(s) known to produce the compound ==
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* left-end-position:
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* [[RXN-5468]]
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** 8794
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== Reaction(s) of unknown directionality ==
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* centisome-position:
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{{#set: common-name=α-d-man-a-(1→2)-α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→2)-α-d-man-(1→3)-[α-d-man-(1→6)]-α-d-man-(1→6)]-β-d-man-(1→4)-β-d-glcnac-(1→4)-α-d-glcnac-diphosphodolichol}}
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** 3.7520747   
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== Organism(s) associated with this gene  ==
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* [[S.japonica_sterols_curated]]
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== Reaction(s) associated ==
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* [[RXN-9839]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6082]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6073]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=30604}}
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{{#set: left-end-position=8794}}
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{{#set: centisome-position=3.7520747    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=2}}

Revision as of 20:19, 18 December 2020

Gene SJ18882

  • transcription-direction:
    • positive
  • right-end-position:
    • 30604
  • left-end-position:
    • 8794
  • centisome-position:
    • 3.7520747

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6082
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6073
    • 3 reactions found over 3 reactions in the full pathway




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