Difference between revisions of "SJ09130"

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(Created page with "Category:gene == Gene SJ1973 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-7978 ** Category: [...")
(Created page with "Category:gene == Gene SJ09130 == * transcription-direction: ** positive * right-end-position: ** 27323 * left-end-position: ** 906 * centisome-position: ** 2.016156 ==...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ1973 ==
+
== Gene SJ09130 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 27323
 +
* left-end-position:
 +
** 906
 +
* centisome-position:
 +
** 2.016156   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-7978]]
+
* [[ATPASE-RXN]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7979]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11109]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5945]]
+
* [[PWY-6545]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5174]]
+
* [[PWY-7210]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=27323}}
 +
{{#set: left-end-position=906}}
 +
{{#set: centisome-position=2.016156    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:04, 18 March 2021

Gene SJ09130

  • transcription-direction:
    • positive
  • right-end-position:
    • 27323
  • left-end-position:
    • 906
  • centisome-position:
    • 2.016156

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09130&oldid=133559"