Difference between revisions of "SJ09169"

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(Created page with "Category:gene == Gene SJ08599 == * transcription-direction: ** positive * right-end-position: ** 647130 * left-end-position: ** 636108 * centisome-position: ** 74.06733...")
(Created page with "Category:gene == Gene SJ16876 == * transcription-direction: ** negative * right-end-position: ** 121813 * left-end-position: ** 115362 * centisome-position: ** 41.8427...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08599 ==
+
== Gene SJ16876 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 647130
+
** 121813
 
* left-end-position:
 
* left-end-position:
−
** 636108
+
** 115362
 
* centisome-position:
 
* centisome-position:
−
** 74.06733    
+
** 41.8427    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[GAMMA-GLUTAMYLTRANSFERASE-RXN]]
+
* [[GSHTRAN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12618]]
+
* [[GST-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-18092]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
−
* [[RXN-6601]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-13673]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-9157]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN66-336]]
+
* [[RXN-15680]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 41: Line 38:
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7559]]
+
* [[PWY-6842]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-4041]]
+
* [[PWY-4061]]
−
** '''5''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5826]]
+
* [[PWY66-374]]
−
** '''2''' reactions found over '''14''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY66-375]]
+
* [[PWY-7112]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7533]]
−
{{#set: right-end-position=647130}}
+
** '''3''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=636108}}
+
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=74.06733   }}
+
{{#set: right-end-position=121813}}
 +
{{#set: left-end-position=115362}}
 +
{{#set: centisome-position=41.8427   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=5}}

Revision as of 08:16, 15 March 2021

Gene SJ16876

  • transcription-direction:
    • negative
  • right-end-position:
    • 121813
  • left-end-position:
    • 115362
  • centisome-position:
    • 41.8427

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY66-374
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09169&oldid=119793"