Difference between revisions of "SJ09219"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-126 CPD1F-126] == * common-name: ** γ-carotene * smiles: ** cc(=cccc(=cc=cc(=cc=cc(...")
(Created page with "Category:gene == Gene SJ16375 == * transcription-direction: ** negative * right-end-position: ** 239101 * left-end-position: ** 228391 * centisome-position: ** 80.77318...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-126 CPD1F-126] ==
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== Gene SJ16375 ==
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* common-name:
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* transcription-direction:
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** γ-carotene
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** negative
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* smiles:
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* right-end-position:
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** cc(=cccc(=cc=cc(=cc=cc(=cc=cc=c(c=cc=c(c=cc1(c(c)(c)cccc=1c))c)c)c)c)c)c
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** 239101
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* inchi-key:
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* left-end-position:
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** hrqkoyfghjyefs-bxolysjbsa-n
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** 228391
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* molecular-weight:
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* centisome-position:
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** 536.882
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** 80.77318   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN1F-151]]
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* [[S.japonica_sterols_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN1F-150]]
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* [[ATPASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=γ-carotene}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=hrqkoyfghjyefs-bxolysjbsa-n}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: molecular-weight=536.882}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=239101}}
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{{#set: left-end-position=228391}}
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{{#set: centisome-position=80.77318    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Revision as of 20:20, 18 December 2020

Gene SJ16375

  • transcription-direction:
    • negative
  • right-end-position:
    • 239101
  • left-end-position:
    • 228391
  • centisome-position:
    • 80.77318

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




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