Difference between revisions of "SJ09236"

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(Created page with "Category:gene == Gene SJ03663 == * transcription-direction: ** negative * right-end-position: ** 419002 * left-end-position: ** 413065 * centisome-position: ** 79.17111...")
(Created page with "Category:gene == Gene SJ08104 == * transcription-direction: ** positive * right-end-position: ** 10319 * left-end-position: ** 4210 * centisome-position: ** 0.94575715...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03663 ==
+
== Gene SJ08104 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 419002
+
** 10319
 
* left-end-position:
 
* left-end-position:
−
** 413065
+
** 4210
 
* centisome-position:
 
* centisome-position:
−
** 79.17111    
+
** 0.94575715    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[METHYLCROTONYL-COA-CARBOXYLASE-RXN]]
−
* [[HEMN-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-14950]]
+
* [[PROPIONYL-COA-CARBOXY-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14957]]
+
* [[RXN1G-4355]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14959]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17127]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8654]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8655]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-949]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[HEMESYN2-PWY]]
+
* [[LEU-DEG2-PWY]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5531]]
+
* [[PWY-5789]]
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''8''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-7382]]
+
* [[PWY-5743]]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY0-522]]
+
* [[PROPIONMET-PWY]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6984]]
+
* [[PWY-6728]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''11''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY0-1275]]
+
* [[PWY-7384]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY0-501]]
+
* [[PWYG-321]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''26''' reactions found over '''182''' reactions in the full pathway
−
* [[PWY-6987]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=10319}}
−
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=4210}}
−
{{#set: right-end-position=419002}}
+
{{#set: centisome-position=0.94575715   }}
−
{{#set: left-end-position=413065}}
 
−
{{#set: centisome-position=79.17111   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=7}}

Revision as of 15:15, 5 January 2021

Gene SJ08104

  • transcription-direction:
    • positive
  • right-end-position:
    • 10319
  • left-end-position:
    • 4210
  • centisome-position:
    • 0.94575715

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • LEU-DEG2-PWY
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PROPIONMET-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6728
    • 11 reactions found over 19 reactions in the full pathway
  • PWY-7384
    • 6 reactions found over 10 reactions in the full pathway
  • PWYG-321
    • 26 reactions found over 182 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09236&oldid=66834"